Analysis Gallery

Code from Research Publications

Coding examples and github repositories for the Nature 2025 research publications

The MICrONS Consortium Functional connectomics spanning multiple areas of mouse visual cortex

Schneider-Mizell et al. Inhibitory specificity from a connectomic census of mouse visual cortex

Ding et al. Functional connectomics reveals general wiring rule in mouse visual cortex

Wang et al. Foundation model of neural activity predicts response to new stimulus types

Elabbady et al. Perisomatic ultrastructure efficiently classifies cells in mouse cortex

Gamlin et al. Connectomics of predicted Sst transcriptomic types in mouse visual cortex

Celii et al. NEURD offers automated proofreading and feature extraction for connectomics

Dorkenwald et al. CAVE Connectome Annotation Versioning Engine